BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E04SP1|AL425705
(749 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1601 1317 0.0
>3x_Contig1601
Length = 11162
Score = 1317 bits (648), Expect = 0.0
Identities = 712/750 (94%), Gaps = 1/750 (0%)
Strand = Plus / Minus
Query: 1 accacatacttggcattgtaactcgatgattcttgtgttcttttgttcatgtagaaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5839 accacatacttggcattgtaactcgatgattcttgtgttcttttgttcatgtagaaatgt 5780
Query: 61 gttagtctgttaaagtgacaatgcctttttatactcgttcggtattctgacattgaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5779 gttagtctgttaaagtgacaatgcctttttatactcgttcggtattctgacattgaattt 5720
Query: 121 ttcamammtttcagagttcgtactatgtcgaatactgamagcmtcctcatttccmaatca 180
|||| | |||||||||||||||||||||||||||||| ||| ||||||||||| |||||
Sbjct: 5719 ttcaaaaatttcagagttcgtactatgtcgaatactgaaagcatcctcatttccaaatca 5660
Query: 181 ggaaatthgtcctatagttgacaatacaatggtgtacgggcgataacagtcctgtcaccm 240
||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5659 ggaaattagtcctatagttgaaaatacaatggtgtacgggcgataacagtcctgtcacca 5600
Query: 241 aaccataacctggtgtcctagamagthgttatgamgtggacgggaggctaggtgttgacg 300
|||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||
Sbjct: 5599 aaccataacctggtgtcctagaaagtagttatgaagtggacgggaggctaggtgttgacg 5540
Query: 301 gaatgccagagctcatcacacacttggtttggtcagtttggaattwamaaggttgccaga 360
|||||| |||||||||||||||||||||||||||||||||||||| | |||||||| |||
Sbjct: 5539 gaatgcaagagctcatcacacacttggtttggtcagtttggaattaaaaaggttgcaaga 5480
Query: 361 gtagataatgccaaagtwtggmatcattctgctaaathtgtwtgamtyagataamcmtgt 420
||||||||||| ||||| ||| ||||||||||||||| ||| ||| | |||||| |||
Sbjct: 5479 gtagataatgcaaaagtatggaatcattctgctaaatatgtatgaataagataaaaatgt 5420
Query: 421 taahmtactttggtgtcagccataccgacttactgactatcgttattttwctgamctgaa 480
||| ||||||||||||||| |||||||||||||||||||||||||||| |||| |||||
Sbjct: 5419 taaaatactttggtgtcagcaataccgacttactgactatcgttattttactgaactgaa 5360
Query: 481 gccgcttgttgtcaccgttgtgaatgcctatgtttaagtagaaagamccctttatagttc 540
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5359 gcagcttgttgtcaccgttgtgaatgcctatgtttaagtagaaagaaccctttatagttc 5300
Query: 541 agaatggtagtccttgatgatagtctcgacatcttcgatacttagttgcctgacatcacc 600
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5299 agaatggtagtccttgatgatagtatcgacatcttcgatacttagttgcctgacatcacc 5240
Query: 601 tatctgtttaatcttagatgttacttccttmatttggtcatcggataamtgc-catttag 659
|||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct: 5239 tatctgtttaatcttagatgttacttccttaatttggtcatcggataaatgcaaatttag 5180
Query: 660 ttgttcgacacgagacttgattgcgttccaaccagttaatctgttggcaaagtgaatata 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5179 ttgttcgacacgagacttgattgcgttccaaccagttaatctgttggcaaagtgaatata 5120
Query: 720 tctcttcataccgaaatcttctggatttag 749
||||||||||||||||||||||||||||||
Sbjct: 5119 tctcttcataccgaaatcttctggatttag 5090
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3159
Number of Sequences: 1807
Number of extensions: 3159
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 749
length of database: 10,358,551
effective HSP length: 16
effective length of query: 733
effective length of database: 10,329,639
effective search space: 7571625387
effective search space used: 7571625387
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.1 bits)